Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh17E9PXF0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh17E9PXF0 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh17E9PXF0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh17E9PXF0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh17E9PXF0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh17E9PXF0 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.97□□□□□ -0.49
Pcdh17E9PXF0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh17E9PXF0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh17E9PXF0 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.97□□□□□ -0.49
Pcdh17E9PXF0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh17E9PXF0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh17E9PXF0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Gm4986-201ENSMUST00000119731 549 ntBASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Gm4857-201ENSMUST00000192718 785 ntBASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh17E9PXF0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh17E9PXF0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Pcdh17E9PXF0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh17E9PXF0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh17E9PXF0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh17E9PXF0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh17E9PXF0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh17E9PXF0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh17E9PXF0 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh17E9PXF0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Gm22323-201ENSMUST00000103832 109 ntBASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Gm32025-201ENSMUST00000217960 307 ntBASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms