Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Gm12502-201ENSMUST00000120197 444 ntBASIC14.98□□□□□ -0.01
Usp42B2RQC2 Gm11964-201ENSMUST00000120982 444 ntBASIC14.98□□□□□ -0.01
Usp42B2RQC2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Usp42B2RQC2 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Gm19184-201ENSMUST00000196798 928 ntBASIC14.98□□□□□ -0.01
Usp42B2RQC2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Gm5781-201ENSMUST00000219792 443 ntBASIC14.98□□□□□ -0.01
Usp42B2RQC2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.98□□□□□ -0.01
Usp42B2RQC2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp42B2RQC2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.97□□□□□ -0.01
Usp42B2RQC2 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.97□□□□□ -0.01
Usp42B2RQC2 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.97□□□□□ -0.01
Usp42B2RQC2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.97□□□□□ -0.01
Usp42B2RQC2 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Daam2-202ENSMUST00000224595 1926 ntBASIC14.97□□□□□ -0.01
Usp42B2RQC2 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp42B2RQC2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.96□□□□□ -0.01
Usp42B2RQC2 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.96□□□□□ -0.01
Usp42B2RQC2 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.96□□□□□ -0.01
Usp42B2RQC2 Gm38002-201ENSMUST00000193255 180 ntBASIC14.96□□□□□ -0.01
Usp42B2RQC2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.96□□□□□ -0.01
Usp42B2RQC2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Usp42B2RQC2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.96□□□□□ -0.01
Usp42B2RQC2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp42B2RQC2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Usp42B2RQC2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Usp42B2RQC2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
Usp42B2RQC2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Usp42B2RQC2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Usp42B2RQC2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Usp42B2RQC2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Usp42B2RQC2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Usp42B2RQC2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Usp42B2RQC2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Usp42B2RQC2 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Usp42B2RQC2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms