Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm11127A7VMS2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Gm11127A7VMS2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm11127A7VMS2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm11127A7VMS2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Gm11127A7VMS2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm11127A7VMS2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm11127A7VMS2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.39□□□□□ -0.59
Gm11127A7VMS2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm11127A7VMS2 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Map1b-203ENSMUST00000223725 2669 ntBASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Gm27306-201ENSMUST00000183970 107 ntBASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Gm27772-201ENSMUST00000184900 187 ntBASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Gm20445-201ENSMUST00000061905 565 ntBASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.38□□□□□ -0.59
Gm11127A7VMS2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms