Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Scn1aA2APX8 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.37□□□□□ -0.27
Scn1aA2APX8 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.36□□□□□ -0.27
Scn1aA2APX8 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Gm14726-201ENSMUST00000120623 896 ntBASIC13.36□□□□□ -0.27
Scn1aA2APX8 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.36□□□□□ -0.27
Scn1aA2APX8 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1aA2APX8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Gm27320-201ENSMUST00000184892 109 ntBASIC13.35□□□□□ -0.27
Scn1aA2APX8 Gm31256-201ENSMUST00000194705 506 ntBASIC13.35□□□□□ -0.27
Scn1aA2APX8 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Gm45925-201ENSMUST00000218882 744 ntBASIC13.35□□□□□ -0.27
Scn1aA2APX8 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.35□□□□□ -0.27
Scn1aA2APX8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Gm27046-201ENSMUST00000182160 463 ntBASIC13.35□□□□□ -0.27
Scn1aA2APX8 Gm19994-201ENSMUST00000217086 586 ntBASIC13.35□□□□□ -0.27
Scn1aA2APX8 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1aA2APX8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms