Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Mir7684-201ENSMUST00000183858 60 ntBASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Gm27989-201ENSMUST00000184721 107 ntBASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Gm43575-201ENSMUST00000196420 516 ntBASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Gm6458-201ENSMUST00000211573 635 ntBASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Itm2b-204ENSMUST00000228637 783 ntBASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav12d-1A0N8R0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Gm22189-201ENSMUST00000103822 86 ntBASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Gm14350-201ENSMUST00000116642 640 ntBASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Gm5687-201ENSMUST00000118252 640 ntBASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Gm13689-201ENSMUST00000119360 685 ntBASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Gm44397-201ENSMUST00000195950 113 ntBASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms