Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap99A0A140LIX9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap99A0A140LIX9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap99A0A140LIX9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap99A0A140LIX9 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cfap99A0A140LIX9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap99A0A140LIX9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap99A0A140LIX9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cfap99A0A140LIX9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Gm4768-201ENSMUST00000206199 686 ntBASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Gm6082-201ENSMUST00000215204 454 ntBASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Cfap99A0A140LIX9 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Gm17376-201ENSMUST00000166016 84 ntBASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.34■□□□□ 0.05
Cfap99A0A140LIX9 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.33■□□□□ 0.05
Cfap99A0A140LIX9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cfap99A0A140LIX9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.33■□□□□ 0.05
Cfap99A0A140LIX9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cfap99A0A140LIX9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cfap99A0A140LIX9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cfap99A0A140LIX9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cfap99A0A140LIX9 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cfap99A0A140LIX9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.33■□□□□ 0.04
Cfap99A0A140LIX9 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cfap99A0A140LIX9 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cfap99A0A140LIX9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cfap99A0A140LIX9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms