Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm13385-201ENSMUST00000121089 220 ntBASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm5866-201ENSMUST00000177881 973 ntBASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm27437-201ENSMUST00000183429 107 ntBASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm43727-201ENSMUST00000198021 2647 ntBASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav6n-6A0A075B6B2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm16215-201ENSMUST00000161990 637 ntBASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm29667-201ENSMUST00000190817 490 ntBASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm17795-201ENSMUST00000214505 757 ntBASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm19220-201ENSMUST00000222682 803 ntBASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm9797-201ENSMUST00000052902 613 ntBASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav6n-6A0A075B6B2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
Trav6n-6A0A075B6B2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav6n-6A0A075B6B2 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms