Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Gm12859-201ENSMUST00000117834 427 ntBASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Gm10576-201ENSMUST00000191927 825 ntBASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Gm6983-201ENSMUST00000214912 628 ntBASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 AC158982.1-201ENSMUST00000228377 901 ntBASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Gm2423-201ENSMUST00000074863 733 ntBASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav5-4A0A075B652 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
Trav5-4A0A075B652 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Trav5-4A0A075B652 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav5-4A0A075B652 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Trav5-4A0A075B652 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Trav5-4A0A075B652 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav5-4A0A075B652 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav5-4A0A075B652 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.77□□□□□ -0.68
Trav5-4A0A075B652 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.77□□□□□ -0.68
Trav5-4A0A075B652 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav5-4A0A075B652 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav5-4A0A075B652 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav5-4A0A075B652 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav5-4A0A075B652 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav5-4A0A075B652 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav5-4A0A075B652 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Auts2-212ENSMUST00000178555 309 ntBASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Gm27437-201ENSMUST00000183429 107 ntBASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Gm44397-201ENSMUST00000195950 113 ntBASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Gm18624-201ENSMUST00000220966 658 ntBASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Gm5626-201ENSMUST00000222151 1058 ntBASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms