Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb2S4R1M3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Gm24644-201ENSMUST00000157114 139 ntBASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Gm27839-201ENSMUST00000184242 106 ntBASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Gm10146-201ENSMUST00000072739 309 ntBASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb2S4R1M3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb2S4R1M3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Gm14704-201ENSMUST00000120300 874 ntBASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Gm17208-201ENSMUST00000168388 535 ntBASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Gm27331-201ENSMUST00000183705 60 ntBASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Gm29705-201ENSMUST00000212598 474 ntBASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Mir339-201ENSMUST00000083659 96 ntBASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb2S4R1M3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
H2afb2S4R1M3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
H2afb2S4R1M3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
H2afb2S4R1M3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
H2afb2S4R1M3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Gm37042-201ENSMUST00000193816 581 ntBASIC12.83□□□□□ -0.36
H2afb2S4R1M3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms