Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.58□□□□□ -0.55
H2afb3S4R1G7 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H2afb3S4R1G7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Gm16202-201ENSMUST00000117532 544 ntBASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.57□□□□□ -0.56
H2afb3S4R1G7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms