Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Gm13453-201ENSMUST00000118708 357 ntBASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Gm42550-201ENSMUST00000201553 960 ntBASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Gm9063-201ENSMUST00000223299 582 ntBASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk1bQ9Z2C6 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Gm11978-201ENSMUST00000122315 466 ntBASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1bQ9Z2C6 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.9□□□□□ -0.51
Upk1bQ9Z2C6 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Upk1bQ9Z2C6 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Upk1bQ9Z2C6 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
Upk1bQ9Z2C6 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
Upk1bQ9Z2C6 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Upk1bQ9Z2C6 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.9□□□□□ -0.51
Upk1bQ9Z2C6 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.9□□□□□ -0.51
Upk1bQ9Z2C6 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Mir686-201ENSMUST00000102174 109 ntBASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Gm22175-201ENSMUST00000175007 78 ntBASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Gm19184-201ENSMUST00000196798 928 ntBASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Gm5279-201ENSMUST00000199575 745 ntBASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Gm8396-201ENSMUST00000057361 823 ntBASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1bQ9Z2C6 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms