Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.87□□□□□ -0.51
ClcnkaQ9WUB7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.87□□□□□ -0.51
ClcnkaQ9WUB7 Gm5035-201ENSMUST00000215581 927 ntBASIC11.87□□□□□ -0.51
ClcnkaQ9WUB7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClcnkaQ9WUB7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClcnkaQ9WUB7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClcnkaQ9WUB7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClcnkaQ9WUB7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClcnkaQ9WUB7 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.87□□□□□ -0.51
ClcnkaQ9WUB7 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClcnkaQ9WUB7 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClcnkaQ9WUB7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
ClcnkaQ9WUB7 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClcnkaQ9WUB7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClcnkaQ9WUB7 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClcnkaQ9WUB7 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
ClcnkaQ9WUB7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
ClcnkaQ9WUB7 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ClcnkaQ9WUB7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Gm11814-201ENSMUST00000119515 929 ntBASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Gm11803-201ENSMUST00000119966 444 ntBASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Gm10156-201ENSMUST00000122364 462 ntBASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Gm8810-201ENSMUST00000172895 754 ntBASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Gm6458-201ENSMUST00000211573 635 ntBASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.86□□□□□ -0.51
ClcnkaQ9WUB7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Gm27839-201ENSMUST00000184242 106 ntBASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Gm10012-201ENSMUST00000078252 192 ntBASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms