Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Gm15770-201ENSMUST00000117498 584 ntBASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Gm13015-201ENSMUST00000118674 204 ntBASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pfdn5Q9WU28 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Gm15678-201ENSMUST00000117573 960 ntBASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Mir1895-201ENSMUST00000122615 79 ntBASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Gm4804-201ENSMUST00000182234 999 ntBASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Gm27494-201ENSMUST00000184735 189 ntBASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pfdn5Q9WU28 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Pfdn5Q9WU28 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pfdn5Q9WU28 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.54□□□□□ -0.72
Pfdn5Q9WU28 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pfdn5Q9WU28 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pfdn5Q9WU28 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pfdn5Q9WU28 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.54□□□□□ -0.72
Pfdn5Q9WU28 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pfdn5Q9WU28 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.54□□□□□ -0.72
Pfdn5Q9WU28 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pfdn5Q9WU28 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pfdn5Q9WU28 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms