Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Gm14832-201ENSMUST00000121289 322 ntBASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Gm25890-201ENSMUST00000177643 165 ntBASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Gm22614-201ENSMUST00000178300 165 ntBASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 AA914427-201ENSMUST00000193194 1166 ntBASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Gm31256-201ENSMUST00000194705 506 ntBASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Gm42937-201ENSMUST00000197360 752 ntBASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Gm45224-201ENSMUST00000208203 414 ntBASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Gm22042-201ENSMUST00000082989 165 ntBASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Gm26232-201ENSMUST00000083360 166 ntBASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Gm24136-201ENSMUST00000083374 165 ntBASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Gm26110-201ENSMUST00000083971 165 ntBASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn8aQ9WTU3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
Scn8aQ9WTU3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Scn8aQ9WTU3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Scn8aQ9WTU3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Scn8aQ9WTU3 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.83□□□□□ -0.35
Scn8aQ9WTU3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Scn8aQ9WTU3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Scn8aQ9WTU3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.35
Scn8aQ9WTU3 Gm27320-201ENSMUST00000184892 109 ntBASIC12.83□□□□□ -0.35
Scn8aQ9WTU3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.83□□□□□ -0.35
Scn8aQ9WTU3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Scn8aQ9WTU3 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.83□□□□□ -0.35
Scn8aQ9WTU3 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.83□□□□□ -0.35
Scn8aQ9WTU3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.83□□□□□ -0.35
Scn8aQ9WTU3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Scn8aQ9WTU3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Scn8aQ9WTU3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Gm15547-201ENSMUST00000122152 333 ntBASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Scn8aQ9WTU3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Gm14760-201ENSMUST00000121831 999 ntBASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Gm44958-201ENSMUST00000203734 736 ntBASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms