Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Gm38117-201ENSMUST00000194653 939 ntBASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a4Q9QZR9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a4Q9QZR9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.52□□□□□ -0.4
Col4a4Q9QZR9 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a4Q9QZR9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a4Q9QZR9 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a4Q9QZR9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a4Q9QZR9 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a4Q9QZR9 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.52□□□□□ -0.4
Col4a4Q9QZR9 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a4Q9QZR9 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.52□□□□□ -0.4
Col4a4Q9QZR9 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.52□□□□□ -0.4
Col4a4Q9QZR9 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Col4a4Q9QZR9 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Col4a4Q9QZR9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a4Q9QZR9 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a4Q9QZR9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a4Q9QZR9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a4Q9QZR9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a4Q9QZR9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a4Q9QZR9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Col4a4Q9QZR9 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Col4a4Q9QZR9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Col4a4Q9QZR9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Col4a4Q9QZR9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Col4a4Q9QZR9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Col4a4Q9QZR9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a4Q9QZR9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a4Q9QZR9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a4Q9QZR9 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.52□□□□□ -0.41
Col4a4Q9QZR9 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a4Q9QZR9 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a4Q9QZR9 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm13549-201ENSMUST00000118339 796 ntBASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Mir6407-201ENSMUST00000184510 101 ntBASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms