Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chaf1aQ9QWF0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Gm12341-201ENSMUST00000119724 503 ntBASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Gm5186-201ENSMUST00000218781 920 ntBASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chaf1aQ9QWF0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Gm2423-201ENSMUST00000074863 733 ntBASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chaf1aQ9QWF0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms