Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a2Q9JLR1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a2Q9JLR1 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61a2Q9JLR1 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Sec61a2Q9JLR1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Gm37444-201ENSMUST00000193605 439 ntBASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a2Q9JLR1 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Gm9002-201ENSMUST00000178437 499 ntBASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Gm27839-201ENSMUST00000184242 106 ntBASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Gm27892-201ENSMUST00000185017 106 ntBASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.59□□□□□ -0.55
Sec61a2Q9JLR1 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms