Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Mmp1bQ9EPL6 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Gm5866-201ENSMUST00000177881 973 ntBASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Gm29608-201ENSMUST00000190444 463 ntBASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Mmp1bQ9EPL6 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Gm12485-201ENSMUST00000119641 291 ntBASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mmp1bQ9EPL6 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms