Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn3Q9DCB1 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Gm24158-201ENSMUST00000175263 71 ntBASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Gm26035-201ENSMUST00000083065 308 ntBASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms