Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3bl1Q9D701 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3bl1Q9D701 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Upk3bl1Q9D701 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3bl1Q9D701 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3bl1Q9D701 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3bl1Q9D701 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3bl1Q9D701 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3bl1Q9D701 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3bl1Q9D701 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Upk3bl1Q9D701 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Gm45071-201ENSMUST00000205353 571 ntBASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk3bl1Q9D701 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 AW822252-206ENSMUST00000208904 237 ntBASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Upk3bl1Q9D701 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3bl1Q9D701 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3bl1Q9D701 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.73□□□□□ -0.53
Upk3bl1Q9D701 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Upk3bl1Q9D701 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3bl1Q9D701 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3bl1Q9D701 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.73□□□□□ -0.53
Upk3bl1Q9D701 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms