Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp48Q9D361 Gm19163-201ENSMUST00000223313 780 ntBASIC12.83□□□□□ -0.36
Snrnp48Q9D361 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Snrnp48Q9D361 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp48Q9D361 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp48Q9D361 Mir339-201ENSMUST00000083659 96 ntBASIC12.83□□□□□ -0.36
Snrnp48Q9D361 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Snrnp48Q9D361 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp48Q9D361 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Snrnp48Q9D361 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp48Q9D361 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.83□□□□□ -0.36
Snrnp48Q9D361 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp48Q9D361 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snrnp48Q9D361 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.82□□□□□ -0.36
Snrnp48Q9D361 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Gm7029-201ENSMUST00000173226 450 ntBASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Gm23363-201ENSMUST00000175024 79 ntBASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp48Q9D361 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Snord83b-201ENSMUST00000104546 94 ntBASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Gm27682-201ENSMUST00000183930 110 ntBASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Rubie-203ENSMUST00000227803 2430 ntBASIC12.81□□□□□ -0.36
Snrnp48Q9D361 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp48Q9D361 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms