Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Snf8Q9CZ28 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Snf8Q9CZ28 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snf8Q9CZ28 Gm22189-201ENSMUST00000103822 86 ntBASIC13.23□□□□□ -0.29
Snf8Q9CZ28 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snf8Q9CZ28 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.23□□□□□ -0.29
Snf8Q9CZ28 Auts2-212ENSMUST00000178555 309 ntBASIC13.23□□□□□ -0.29
Snf8Q9CZ28 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snf8Q9CZ28 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.23□□□□□ -0.29
Snf8Q9CZ28 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snf8Q9CZ28 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Snf8Q9CZ28 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Snf8Q9CZ28 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Snf8Q9CZ28 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snf8Q9CZ28 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snf8Q9CZ28 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Snf8Q9CZ28 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snf8Q9CZ28 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snf8Q9CZ28 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snf8Q9CZ28 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Snf8Q9CZ28 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.23□□□□□ -0.29
Snf8Q9CZ28 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Syt7-204ENSMUST00000223586 1344 ntBASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Gm13813-201ENSMUST00000120998 787 ntBASIC13.22□□□□□ -0.29
Snf8Q9CZ28 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Snf8Q9CZ28 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Gm14350-201ENSMUST00000116642 640 ntBASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Gm16202-201ENSMUST00000117532 544 ntBASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Gm15321-201ENSMUST00000121290 288 ntBASIC13.21□□□□□ -0.29
Snf8Q9CZ28 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Gm6458-201ENSMUST00000211573 635 ntBASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Gm7730-201ENSMUST00000212486 454 ntBASIC13.21□□□□□ -0.29
Snf8Q9CZ28 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Snf8Q9CZ28 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Snf8Q9CZ28 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Snf8Q9CZ28 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Snf8Q9CZ28 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.21□□□□□ -0.3
Snf8Q9CZ28 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Snf8Q9CZ28 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Snf8Q9CZ28 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Snf8Q9CZ28 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Snf8Q9CZ28 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms