Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Rpusd4Q9CWX4 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpusd4Q9CWX4 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpusd4Q9CWX4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rpusd4Q9CWX4 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Gm11424-201ENSMUST00000121929 829 ntBASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Gm5069-202ENSMUST00000192714 1011 ntBASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Gm38144-201ENSMUST00000192790 465 ntBASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Gm38223-201ENSMUST00000194484 695 ntBASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Gm7653-201ENSMUST00000214567 508 ntBASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpusd4Q9CWX4 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Gm6983-201ENSMUST00000214912 628 ntBASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpusd4Q9CWX4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms