Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smurf1Q9CUN6 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smurf1Q9CUN6 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Smurf1Q9CUN6 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.7□□□□□ -0.54
Smurf1Q9CUN6 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smurf1Q9CUN6 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smurf1Q9CUN6 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smurf1Q9CUN6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Gm6912-201ENSMUST00000117218 544 ntBASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Gm24420-201ENSMUST00000176676 59 ntBASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Gm27533-201ENSMUST00000183800 152 ntBASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Gm6888-201ENSMUST00000221983 706 ntBASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smurf1Q9CUN6 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Gm15393-201ENSMUST00000120499 219 ntBASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms