Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Lrrc40Q9CRC8 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.36
Lrrc40Q9CRC8 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Lrrc40Q9CRC8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lrrc40Q9CRC8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.77□□□□□ -0.36
Lrrc40Q9CRC8 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lrrc40Q9CRC8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lrrc40Q9CRC8 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lrrc40Q9CRC8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Lrrc40Q9CRC8 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Gm8805-201ENSMUST00000117848 313 ntBASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Gm11803-201ENSMUST00000119966 444 ntBASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Mir339-201ENSMUST00000083659 96 ntBASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lrrc40Q9CRC8 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Gm2231-201ENSMUST00000125661 612 ntBASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Gm8810-201ENSMUST00000172895 754 ntBASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Gm6244-201ENSMUST00000178732 841 ntBASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lrrc40Q9CRC8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Gm9002-201ENSMUST00000178437 499 ntBASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Gm37497-201ENSMUST00000195830 798 ntBASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Gm8099-201ENSMUST00000200510 742 ntBASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Lrrc40Q9CRC8 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms