Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Mir874-201ENSMUST00000104769 76 ntBASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Gm16202-201ENSMUST00000117532 544 ntBASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Gm6027-201ENSMUST00000121467 756 ntBASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Gm24196-201ENSMUST00000179161 110 ntBASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Gm42588-201ENSMUST00000200538 1297 ntBASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Gm44061-201ENSMUST00000203962 1195 ntBASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Gm18041-201ENSMUST00000218210 618 ntBASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retreg3Q9CQV4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Gm13313-201ENSMUST00000118938 1084 ntBASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Gm13123-201ENSMUST00000122173 492 ntBASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Gm42734-201ENSMUST00000201656 878 ntBASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Gm44237-201ENSMUST00000205183 936 ntBASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Gm7561-201ENSMUST00000211203 886 ntBASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 AC154245.1-201ENSMUST00000224615 601 ntBASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 AC140368.1-202ENSMUST00000226131 658 ntBASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 AC242269.1-201ENSMUST00000227020 741 ntBASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retreg3Q9CQV4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Gm43216-201ENSMUST00000196295 1333 ntBASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Mir466f-2-201ENSMUST00000104805 94 ntBASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.17□□□□□ -0.3
Retreg3Q9CQV4 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms