Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb1Q9CQ70 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
H2afb1Q9CQ70 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.52□□□□□ -0.72
H2afb1Q9CQ70 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
H2afb1Q9CQ70 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
H2afb1Q9CQ70 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
H2afb1Q9CQ70 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
H2afb1Q9CQ70 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.52□□□□□ -0.72
H2afb1Q9CQ70 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Gm11618-201ENSMUST00000117946 267 ntBASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Gm28911-201ENSMUST00000188837 117 ntBASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Gm38671-201ENSMUST00000200573 130 ntBASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb1Q9CQ70 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms