Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Gm27680-201ENSMUST00000184192 160 ntBASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Krt88Q9CPR6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Krt88Q9CPR6 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Krt88Q9CPR6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Krt88Q9CPR6 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Krt88Q9CPR6 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Mir6956-201ENSMUST00000183598 62 ntBASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Gm27430-201ENSMUST00000184585 107 ntBASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Gm44333-201ENSMUST00000197168 107 ntBASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.58□□□□□ -0.56
Krt88Q9CPR6 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms