Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Gm5356-201ENSMUST00000093326 615 ntBASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp1b1Q99LU0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Mir7221-201ENSMUST00000184009 72 ntBASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Chmp1b1Q99LU0 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms