Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.43□□□□□ -0.42
Cstf3Q99LI7 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cstf3Q99LI7 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Gm13612-201ENSMUST00000119276 390 ntBASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Gm28693-202ENSMUST00000190758 331 ntBASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Gm8515-201ENSMUST00000194852 576 ntBASIC12.42□□□□□ -0.42
Cstf3Q99LI7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.42□□□□□ -0.42
Cstf3Q99LI7 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.42□□□□□ -0.42
Cstf3Q99LI7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cstf3Q99LI7 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Gm12091-201ENSMUST00000146791 830 ntBASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Gm38671-201ENSMUST00000200573 130 ntBASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.41□□□□□ -0.42
Cstf3Q99LI7 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.41□□□□□ -0.42
Cstf3Q99LI7 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms