Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd2Q99JR8 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Smarcd2Q99JR8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd2Q99JR8 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd2Q99JR8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.96□□□□□ -0.33
Smarcd2Q99JR8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Smarcd2Q99JR8 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd2Q99JR8 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.96□□□□□ -0.34
Smarcd2Q99JR8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcd2Q99JR8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcd2Q99JR8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Smarcd2Q99JR8 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcd2Q99JR8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcd2Q99JR8 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcd2Q99JR8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.96□□□□□ -0.34
Smarcd2Q99JR8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcd2Q99JR8 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.96□□□□□ -0.34
Smarcd2Q99JR8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcd2Q99JR8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcd2Q99JR8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Gm9083-201ENSMUST00000120423 819 ntBASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Gm45224-201ENSMUST00000208203 414 ntBASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd2Q99JR8 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Gm14263-201ENSMUST00000117955 746 ntBASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Gm5070-201ENSMUST00000177599 862 ntBASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Gm43378-201ENSMUST00000199336 582 ntBASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Gm45433-201ENSMUST00000209386 247 ntBASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd2Q99JR8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.93□□□□□ -0.34
Smarcd2Q99JR8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms