Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Clip1Q922J3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Clip1Q922J3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Clip1Q922J3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC20■□□□□ 0.79
Clip1Q922J3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC20■□□□□ 0.79
Clip1Q922J3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clip1Q922J3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Clip1Q922J3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clip1Q922J3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clip1Q922J3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Clip1Q922J3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clip1Q922J3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC20■□□□□ 0.79
Clip1Q922J3 Grk6-205ENSMUST00000224653 2976 ntBASIC20■□□□□ 0.79
Clip1Q922J3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC20■□□□□ 0.79
Clip1Q922J3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clip1Q922J3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clip1Q922J3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Clip1Q922J3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip1Q922J3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clip1Q922J3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC19.99■□□□□ 0.79
Clip1Q922J3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC19.99■□□□□ 0.79
Clip1Q922J3 Gm45433-201ENSMUST00000209386 247 ntBASIC19.99■□□□□ 0.79
Clip1Q922J3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC19.99■□□□□ 0.79
Clip1Q922J3 CT025694.1-201ENSMUST00000226188 934 ntBASIC19.99■□□□□ 0.79
Clip1Q922J3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip1Q922J3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip1Q922J3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip1Q922J3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Clip1Q922J3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Clip1Q922J3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Clip1Q922J3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Clip1Q922J3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip1Q922J3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip1Q922J3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip1Q922J3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip1Q922J3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip1Q922J3 Gm14644-201ENSMUST00000116671 647 ntBASIC19.98■□□□□ 0.79
Clip1Q922J3 Gm16481-201ENSMUST00000119074 1227 ntBASIC19.98■□□□□ 0.79
Clip1Q922J3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC19.98■□□□□ 0.79
Clip1Q922J3 Gm42937-201ENSMUST00000197360 752 ntBASIC19.98■□□□□ 0.79
Clip1Q922J3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clip1Q922J3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip1Q922J3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip1Q922J3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip1Q922J3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip1Q922J3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Clip1Q922J3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip1Q922J3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Clip1Q922J3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clip1Q922J3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC19.98■□□□□ 0.79
Clip1Q922J3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clip1Q922J3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip1Q922J3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Clip1Q922J3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip1Q922J3 Gm5939-201ENSMUST00000119613 2874 ntBASIC19.98■□□□□ 0.79
Clip1Q922J3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip1Q922J3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clip1Q922J3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip1Q922J3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip1Q922J3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip1Q922J3 Gm5884-201ENSMUST00000036712 1479 ntBASIC19.97■□□□□ 0.79
Clip1Q922J3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip1Q922J3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip1Q922J3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip1Q922J3 Gm22902-201ENSMUST00000158488 302 ntBASIC19.97■□□□□ 0.79
Clip1Q922J3 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Clip1Q922J3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC19.97■□□□□ 0.79
Clip1Q922J3 Gm34767-201ENSMUST00000191813 1062 ntBASIC19.97■□□□□ 0.79
Clip1Q922J3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip1Q922J3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip1Q922J3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Clip1Q922J3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clip1Q922J3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Clip1Q922J3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip1Q922J3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip1Q922J3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC19.97■□□□□ 0.79
Clip1Q922J3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC19.97■□□□□ 0.79
Clip1Q922J3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip1Q922J3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip1Q922J3 Gm27552-201ENSMUST00000183351 62 ntBASIC19.96■□□□□ 0.79
Clip1Q922J3 Gm27844-201ENSMUST00000183613 62 ntBASIC19.96■□□□□ 0.79
Clip1Q922J3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC19.96■□□□□ 0.79
Clip1Q922J3 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC19.96■□□□□ 0.79
Clip1Q922J3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Clip1Q922J3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Clip1Q922J3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Clip1Q922J3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms