Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb1Q91Y08 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Gm4768-201ENSMUST00000206199 686 ntBASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb1Q91Y08 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Snord83b-201ENSMUST00000104546 94 ntBASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Gm18187-201ENSMUST00000196476 984 ntBASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Gm19163-201ENSMUST00000223313 780 ntBASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb1Q91Y08 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb1Q91Y08 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb1Q91Y08 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Pcdhb1Q91Y08 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms