Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.32□□□□□ -0.44
Lsm1Q8VC85 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.32□□□□□ -0.44
Lsm1Q8VC85 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.32□□□□□ -0.44
Lsm1Q8VC85 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm1Q8VC85 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm1Q8VC85 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm1Q8VC85 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm1Q8VC85 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm1Q8VC85 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm1Q8VC85 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.3□□□□□ -0.44
Lsm1Q8VC85 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lsm1Q8VC85 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.3□□□□□ -0.44
Lsm1Q8VC85 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms