Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm17968-201ENSMUST00000194902 784 ntBASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Gm19184-201ENSMUST00000196798 928 ntBASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 AW822252-206ENSMUST00000208904 237 ntBASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Gm44260-201ENSMUST00000204946 2094 ntBASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 AC129336.1-201ENSMUST00000220224 2277 ntBASIC15.45■□□□□ 0.06
Ccdc9Q8VC31 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Gm12882-201ENSMUST00000121696 517 ntBASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Gm37368-201ENSMUST00000193173 3212 ntBASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Gm42463-201ENSMUST00000198041 4886 ntBASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc9Q8VC31 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Gm8000-201ENSMUST00000188378 592 ntBASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Gm44492-201ENSMUST00000197012 141 ntBASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.43■□□□□ 0.06
Ccdc9Q8VC31 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms