Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Gm9063-201ENSMUST00000223299 582 ntBASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup35Q8R4R6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Gm11978-201ENSMUST00000122315 466 ntBASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup35Q8R4R6 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Mir686-201ENSMUST00000102174 109 ntBASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Gm13813-201ENSMUST00000120998 787 ntBASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Gm22175-201ENSMUST00000175007 78 ntBASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Gm9630-201ENSMUST00000178304 885 ntBASIC10.46□□□□□ -0.73
Nup35Q8R4R6 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Gm5279-201ENSMUST00000199575 745 ntBASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Gm8396-201ENSMUST00000057361 823 ntBASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup35Q8R4R6 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms