Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Gm22331-201ENSMUST00000158066 136 ntBASIC12.21□□□□□ -0.45
Ubqln1Q8R317 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
Ubqln1Q8R317 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ubqln1Q8R317 Gm27839-201ENSMUST00000184242 106 ntBASIC12.21□□□□□ -0.45
Ubqln1Q8R317 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.21□□□□□ -0.45
Ubqln1Q8R317 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ubqln1Q8R317 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubqln1Q8R317 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.21□□□□□ -0.45
Ubqln1Q8R317 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.21□□□□□ -0.45
Ubqln1Q8R317 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubqln1Q8R317 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubqln1Q8R317 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ubqln1Q8R317 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubqln1Q8R317 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubqln1Q8R317 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubqln1Q8R317 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.21□□□□□ -0.46
Ubqln1Q8R317 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubqln1Q8R317 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubqln1Q8R317 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ubqln1Q8R317 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubqln1Q8R317 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Ubqln1Q8R317 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ubqln1Q8R317 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ubqln1Q8R317 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ubqln1Q8R317 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Gm11637-201ENSMUST00000120601 592 ntBASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Gm24644-201ENSMUST00000157114 139 ntBASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Gm29649-201ENSMUST00000185649 419 ntBASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Gm18062-201ENSMUST00000208020 547 ntBASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Gm18055-201ENSMUST00000208254 547 ntBASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubqln1Q8R317 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubqln1Q8R317 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ubqln1Q8R317 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubqln1Q8R317 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ubqln1Q8R317 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ubqln1Q8R317 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Ubqln1Q8R317 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubqln1Q8R317 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubqln1Q8R317 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ubqln1Q8R317 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubqln1Q8R317 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.19□□□□□ -0.46
Ubqln1Q8R317 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.19□□□□□ -0.46
Ubqln1Q8R317 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubqln1Q8R317 Mir7085-201ENSMUST00000184353 66 ntBASIC12.19□□□□□ -0.46
Ubqln1Q8R317 Gm7561-201ENSMUST00000211203 886 ntBASIC12.19□□□□□ -0.46
Ubqln1Q8R317 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubqln1Q8R317 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubqln1Q8R317 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms