Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp7Q8R1T1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Chmp7Q8R1T1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Mir5120-201ENSMUST00000175020 78 ntBASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Gm8385-201ENSMUST00000058999 643 ntBASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Gm43823-201ENSMUST00000197391 1808 ntBASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Gm44094-201ENSMUST00000204703 2030 ntBASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp7Q8R1T1 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Gm8798-201ENSMUST00000211877 1661 ntBASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 B9d1os-201ENSMUST00000137010 674 ntBASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp7Q8R1T1 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Acot6-202ENSMUST00000222921 3622 ntBASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Abhd11os-203ENSMUST00000222613 363 ntBASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms