Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clip4Q8CI96 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.96□□□□□ -0.33
Clip4Q8CI96 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Gm27847-201ENSMUST00000183711 107 ntBASIC12.96□□□□□ -0.33
Clip4Q8CI96 Gm27375-201ENSMUST00000183799 107 ntBASIC12.96□□□□□ -0.33
Clip4Q8CI96 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.96□□□□□ -0.33
Clip4Q8CI96 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.96□□□□□ -0.33
Clip4Q8CI96 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.96□□□□□ -0.33
Clip4Q8CI96 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.96□□□□□ -0.33
Clip4Q8CI96 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip4Q8CI96 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.96□□□□□ -0.33
Clip4Q8CI96 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Clip4Q8CI96 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Clip4Q8CI96 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clip4Q8CI96 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clip4Q8CI96 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clip4Q8CI96 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clip4Q8CI96 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clip4Q8CI96 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.96□□□□□ -0.34
Clip4Q8CI96 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clip4Q8CI96 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clip4Q8CI96 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Gm12390-201ENSMUST00000117897 397 ntBASIC12.95□□□□□ -0.34
Clip4Q8CI96 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Gm7561-201ENSMUST00000211203 886 ntBASIC12.95□□□□□ -0.34
Clip4Q8CI96 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.95□□□□□ -0.34
Clip4Q8CI96 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.95□□□□□ -0.34
Clip4Q8CI96 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clip4Q8CI96 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms