Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim9Q8C7M3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Gm8602-201ENSMUST00000184045 607 ntBASIC14.15□□□□□ -0.14
Trim9Q8C7M3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim9Q8C7M3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Trim9Q8C7M3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Gm16296-201ENSMUST00000159905 325 ntBASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.14□□□□□ -0.15
Trim9Q8C7M3 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim9Q8C7M3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.13□□□□□ -0.15
Trim9Q8C7M3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Gm1335-201ENSMUST00000121653 386 ntBASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.13□□□□□ -0.15
Trim9Q8C7M3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim9Q8C7M3 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms