Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Gm12363-201ENSMUST00000122250 668 ntBASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Gm23363-201ENSMUST00000175024 79 ntBASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Gm32025-201ENSMUST00000217960 307 ntBASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Gm19163-201ENSMUST00000223313 780 ntBASIC13.24□□□□□ -0.29
Trub1Q8C0D0 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trub1Q8C0D0 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Gm16177-201ENSMUST00000120728 718 ntBASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Gm29127-201ENSMUST00000188304 517 ntBASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Gm4768-201ENSMUST00000206199 686 ntBASIC13.23□□□□□ -0.29
Trub1Q8C0D0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trub1Q8C0D0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms