Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Sh3rf2Q8BZT2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Gm25214-201ENSMUST00000104573 129 ntBASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Gm29199-201ENSMUST00000187766 775 ntBASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Gm45925-201ENSMUST00000218882 744 ntBASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sh3rf2Q8BZT2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Gm8862-201ENSMUST00000198379 1346 ntBASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Gm23270-201ENSMUST00000104055 131 ntBASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Gm44405-201ENSMUST00000198952 126 ntBASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 CT485787.1-201ENSMUST00000225617 968 ntBASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sh3rf2Q8BZT2 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms