Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Mir1894-201ENSMUST00000122802 81 ntBASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.61□□□□□ -0.23
Trerf1Q8BXJ2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Gm7287-201ENSMUST00000205267 602 ntBASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trerf1Q8BXJ2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trerf1Q8BXJ2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trerf1Q8BXJ2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trerf1Q8BXJ2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trerf1Q8BXJ2 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.59□□□□□ -0.23
Trerf1Q8BXJ2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Trerf1Q8BXJ2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trerf1Q8BXJ2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms