Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Gm42479-201ENSMUST00000198654 1356 ntBASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Gm14767-201ENSMUST00000121559 586 ntBASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Gm7775-201ENSMUST00000218871 853 ntBASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lsm11Q8BUV6 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lsm11Q8BUV6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm11Q8BUV6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Lsm11Q8BUV6 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Lsm11Q8BUV6 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.04□□□□□ -0.64
Lsm11Q8BUV6 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm11Q8BUV6 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.04□□□□□ -0.64
Lsm11Q8BUV6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm11Q8BUV6 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Lsm11Q8BUV6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm11Q8BUV6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm11Q8BUV6 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm11Q8BUV6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Lsm11Q8BUV6 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms