Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cpne3Q8BT60 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cpne3Q8BT60 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne3Q8BT60 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne3Q8BT60 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne3Q8BT60 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne3Q8BT60 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Cpne3Q8BT60 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne3Q8BT60 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne3Q8BT60 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cpne3Q8BT60 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne3Q8BT60 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne3Q8BT60 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne3Q8BT60 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne3Q8BT60 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpne3Q8BT60 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Auts2-212ENSMUST00000178555 309 ntBASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Gm6458-201ENSMUST00000211573 635 ntBASIC12.42□□□□□ -0.42
Cpne3Q8BT60 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne3Q8BT60 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Gm14350-201ENSMUST00000116642 640 ntBASIC12.41□□□□□ -0.42
Cpne3Q8BT60 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Gm5866-201ENSMUST00000177881 973 ntBASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.41□□□□□ -0.42
Cpne3Q8BT60 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.41□□□□□ -0.42
Cpne3Q8BT60 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne3Q8BT60 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms