Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Gm13492-201ENSMUST00000119772 665 ntBASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.62□□□□□ -0.23
Rd3Q8BRE0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.62□□□□□ -0.23
Rd3Q8BRE0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rd3Q8BRE0 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Gm14017-201ENSMUST00000121934 386 ntBASIC13.61□□□□□ -0.23
Rd3Q8BRE0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Gm15276-201ENSMUST00000145953 498 ntBASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Gm24990-201ENSMUST00000157406 323 ntBASIC13.61□□□□□ -0.23
Rd3Q8BRE0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Gm38092-201ENSMUST00000195600 653 ntBASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.61□□□□□ -0.23
Rd3Q8BRE0 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rd3Q8BRE0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Gm14277-201ENSMUST00000121195 360 ntBASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Gm15547-201ENSMUST00000122152 333 ntBASIC13.6□□□□□ -0.23
Rd3Q8BRE0 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms