Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Gm4984-201ENSMUST00000115987 360 ntBASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Gm24196-201ENSMUST00000179161 110 ntBASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cpsf4Q8BQZ5 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Gm15824-201ENSMUST00000119516 955 ntBASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Gm8810-201ENSMUST00000172895 754 ntBASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Gm27847-201ENSMUST00000183711 107 ntBASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Gm27375-201ENSMUST00000183799 107 ntBASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cpsf4Q8BQZ5 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms