Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Chmp2bQ8BJF9 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Gm11978-201ENSMUST00000122315 466 ntBASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Mir7023-201ENSMUST00000185093 64 ntBASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2bQ8BJF9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Chmp2bQ8BJF9 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms