Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmbox1Q8BJA3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.63□□□□□ -0.39
Hmbox1Q8BJA3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmbox1Q8BJA3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Gm7593-201ENSMUST00000187246 644 ntBASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Gm8598-201ENSMUST00000221184 836 ntBASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Gm3222-201ENSMUST00000071282 990 ntBASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.62□□□□□ -0.39
Hmbox1Q8BJA3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Gm20482-202ENSMUST00000174729 825 ntBASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Proscos-202ENSMUST00000178990 666 ntBASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Gm8927-201ENSMUST00000181978 981 ntBASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmbox1Q8BJA3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms