Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Gm6244-201ENSMUST00000178732 841 ntBASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Gm7063-201ENSMUST00000186840 981 ntBASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Gm44069-201ENSMUST00000204898 506 ntBASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Clrn3Q8BHH8 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Gm14350-201ENSMUST00000116642 640 ntBASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Clrn3Q8BHH8 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Gm11814-201ENSMUST00000119515 929 ntBASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clrn3Q8BHH8 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms